Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRAMP1Q96RY5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 STK24P1-201ENST00000455035 1291 ntBASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 EEF1GP8-201ENST00000506566 1154 ntBASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 RN7SKP155-201ENST00000516031 288 ntBASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 KRT8P43-201ENST00000406052 1458 ntBASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
CRAMP1Q96RY5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AC013268.4-201ENST00000637413 2228 ntBASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 KRT18P62-201ENST00000446618 1287 ntBASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 ALG1L3P-201ENST00000503331 765 ntBASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 AC138761.6-201ENST00000583997 1423 ntBASIC17.46■□□□□ 0.39
CRAMP1Q96RY5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CRAMP1Q96RY5 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.46■□□□□ 0.38
CRAMP1Q96RY5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CRAMP1Q96RY5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 AP000354.1-201ENST00000396982 456 ntBASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 PSAT1P2-201ENST00000426107 972 ntBASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 KRT18P37-201ENST00000520711 1282 ntBASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CRAMP1Q96RY5 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms