Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PCDHB17P-202ENST00000623466 3066 ntBASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 LINC00567-201ENST00000569854 3409 ntBASIC13.77□□□□□ -0.21
NR1H4Q96RI1 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NR1H4Q96RI1 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AL133267.1-201ENST00000398220 340 ntBASIC13.76□□□□□ -0.21
NR1H4Q96RI1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AC140658.5-201ENST00000438532 169 ntBASIC13.76□□□□□ -0.21
NR1H4Q96RI1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 KRT19P2-202ENST00000557173 1012 ntBASIC13.76□□□□□ -0.21
NR1H4Q96RI1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 SAMD11P1-201ENST00000571429 661 ntBASIC13.76□□□□□ -0.21
NR1H4Q96RI1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NR1H4Q96RI1 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 KRT18P2-201ENST00000447938 1258 ntBASIC13.75□□□□□ -0.21
NR1H4Q96RI1 RPL13AP23-201ENST00000480739 586 ntBASIC13.75□□□□□ -0.21
NR1H4Q96RI1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AC026979.3-201ENST00000607315 403 ntBASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms