Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 AC073548.1-201ENST00000624088 1882 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 AL512384.1-201ENST00000406683 331 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 AC007969.1-201ENST00000433675 447 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 MYCLP2-201ENST00000449268 967 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 GPR53P-205ENST00000457298 1084 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 AC026434.2-201ENST00000506094 1078 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MIR8072-201ENST00000614241 80 ntBASIC13.38□□□□□ -0.27
SNX18Q96RF0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.38□□□□□ -0.27
SNX18Q96RF0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNX18Q96RF0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AC123567.1-201ENST00000548294 1261 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 AL359711.2-201ENST00000563105 872 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 AC132938.2-201ENST00000579188 680 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AL359881.2-201ENST00000602973 570 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 IGHV3-72-202ENST00000621503 303 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 AL591163.1-201ENST00000641757 987 ntBASIC13.37□□□□□ -0.27
SNX18Q96RF0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms