Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 HSPA8P5-201ENST00000456928 2069 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 AC140912.1-201ENST00000577171 1054 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 AC004790.1-201ENST00000612686 536 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 AL358472.5-202ENST00000641448 1267 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 STRCP1-201ENST00000509801 5328 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 INTS4P2-202ENST00000614726 2019 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 MIR661-201ENST00000384842 89 ntBASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 CRB3P1-201ENST00000449338 276 ntBASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC120045.2-201ENST00000567334 178 ntBASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC007541.1-201ENST00000570282 1469 ntBASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC011498.7-201ENST00000624986 2027 ntBASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms