Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL353726.2-201ENST00000623259 884 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 FKBP4P6-201ENST00000457486 1332 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AP000593.2-201ENST00000542775 1433 ntBASIC13.82□□□□□ -0.2
TM9SF4Q92544 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AC100827.2-201ENST00000563214 1194 ntBASIC13.82□□□□□ -0.2
TM9SF4Q92544 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AL136301.1-201ENST00000615830 422 ntBASIC13.82□□□□□ -0.2
TM9SF4Q92544 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TM9SF4Q92544 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TM9SF4Q92544 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.81□□□□□ -0.2
TM9SF4Q92544 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AC105129.2-201ENST00000559536 390 ntBASIC13.81□□□□□ -0.2
TM9SF4Q92544 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms