Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 FAM90A12P-201ENST00000519497 2375 ntBASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 FAM90A24P-201ENST00000520792 2369 ntBASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 AL139094.1-201ENST00000405549 1188 ntBASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 WFDC1-204ENST00000613603 549 ntBASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.34□□□□□ -0.43
RTN4IP1Q8WWV3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
RTN4IP1Q8WWV3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RTN4IP1Q8WWV3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
RTN4IP1Q8WWV3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC215219.1-201ENST00000400706 1817 ntBASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC114812.1-204ENST00000449669 728 ntBASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms