Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC111170.3-201ENST00000624282 2464 ntBASIC14.79□□□□□ -0.04
SHROOM3Q8TF72 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHROOM3Q8TF72 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHROOM3Q8TF72 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHROOM3Q8TF72 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 EEF1DP6-201ENST00000449232 372 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AL035414.1-201ENST00000451327 857 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 MARK2P5-201ENST00000507649 634 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC023310.1-201ENST00000554836 735 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC015818.8-201ENST00000587907 1519 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 GRK6P1-201ENST00000400595 1711 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 POM121L10P-201ENST00000436994 1285 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AL591846.1-201ENST00000451736 433 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC124068.2-201ENST00000569473 1109 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AL157813.1-201ENST00000612996 587 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 AC138627.1-207ENST00000641560 1006 ntBASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHROOM3Q8TF72 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 AL022313.4-201ENST00000562756 2046 ntBASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 AC006122.1-201ENST00000493323 440 ntBASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 BNIP3P13-201ENST00000599968 566 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms