Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 KRT17P7-201ENST00000451704 1104 ntBASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AC007551.1-201ENST00000457394 519 ntBASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 MIR3197-201ENST00000582241 73 ntBASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP1Q8TDR0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC004945.1-201ENST00000416738 983 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 CD8B2-202ENST00000417670 633 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 COX5BP1-201ENST00000507622 393 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC078819.1-201ENST00000547454 765 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC012085.1-201ENST00000548270 765 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC244669.2-201ENST00000612320 853 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC006453.4-201ENST00000636949 1252 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms