Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AC019109.1-201ENST00000401725 1874 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 CICP12-201ENST00000455801 843 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 RN7SL578P-201ENST00000477781 283 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AL050341.2-201ENST00000567508 1541 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AL954722.1-201ENST00000431238 259 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 GPX3-202ENST00000517973 612 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 RN7SL440P-201ENST00000577855 343 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AC015912.3-201ENST00000619432 348 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AC010531.8-201ENST00000623341 685 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 AC005274.1-201ENST00000623460 802 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCDC168Q8NDH2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 SNRPCP15-201ENST00000424055 192 ntBASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 AP000244.1-201ENST00000424582 201 ntBASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 AC011431.1-201ENST00000512971 230 ntBASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms