Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTBP4Q8N2S1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 USP8-219ENST00000625664 1568 ntTSL 5 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 GSTM2P1-201ENST00000405166 654 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AL049542.1-201ENST00000430231 278 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AKR1B1P3-201ENST00000525311 588 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AL355075.5-201ENST00000553568 890 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 IGHV3OR16-11-201ENST00000565524 349 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AC092535.4-201ENST00000609548 397 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.16■□□□□ 0.66
LTBP4Q8N2S1 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 AC010491.1-201ENST00000563101 2797 ntBASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 OR7E122P-201ENST00000383606 1017 ntBASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 AQP7-207ENST00000447660 998 ntTSL 2 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 PIGA-209ENST00000634582 965 ntTSL 2 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LTBP4Q8N2S1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 SNORA30.1-201ENST00000363193 129 ntBASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 AC004884.1-201ENST00000393647 319 ntBASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 MARCKSL1P2-201ENST00000401037 976 ntBASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 AC253536.1-201ENST00000437021 315 ntBASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 RN7SL789P-201ENST00000478944 293 ntBASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 AC091736.1-201ENST00000609370 305 ntBASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LTBP4Q8N2S1 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 ACP1-207ENST00000439645 605 ntTSL 2 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 DNM1P17-201ENST00000512082 426 ntBASIC19.14■□□□□ 0.65
LTBP4Q8N2S1 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms