Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 AP001267.2-201ENST00000532619 2086 ntBASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 AC004899.1-201ENST00000424687 1714 ntBASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 AC099521.3-201ENST00000624251 2938 ntBASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD3Q6PCD5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AC104073.2-201ENST00000453737 312 ntBASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 BNIP3P13-201ENST00000599968 566 ntBASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 MIR6720-201ENST00000611664 98 ntBASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AL023803.2-201ENST00000620080 638 ntBASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.21■□□□□ 0.03
RFWD3Q6PCD5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms