Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 KRT18P64-201ENST00000434946 1219 ntBASIC11.05□□□□□ -0.64
MRPL54Q6P161 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 KRT19P2-202ENST00000557173 1012 ntBASIC11.05□□□□□ -0.64
MRPL54Q6P161 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 AC015819.3-201ENST00000624305 2674 ntBASIC11.05□□□□□ -0.64
MRPL54Q6P161 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 LINC02486-201ENST00000604157 3000 ntBASIC11.04□□□□□ -0.64
MRPL54Q6P161 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 KRT8P14-201ENST00000414254 1442 ntBASIC11.04□□□□□ -0.64
MRPL54Q6P161 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AC074338.1-201ENST00000416825 156 ntBASIC11.04□□□□□ -0.64
MRPL54Q6P161 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AC112191.1-201ENST00000523689 701 ntBASIC11.04□□□□□ -0.64
MRPL54Q6P161 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AL135744.1-201ENST00000565098 629 ntBASIC11.04□□□□□ -0.64
MRPL54Q6P161 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AKAP8P1-201ENST00000434743 1349 ntBASIC11.04□□□□□ -0.64
MRPL54Q6P161 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.04□□□□□ -0.64
MRPL54Q6P161 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MRPL54Q6P161 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms