Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC104306.2-201ENST00000451877 341 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 TUBB8P8-201ENST00000458717 1058 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC100827.2-201ENST00000563214 1194 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 MIR4538-201ENST00000581377 78 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC027601.3-201ENST00000622907 509 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC010327.5-201ENST00000586923 3061 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 KRT8P29-201ENST00000420409 1371 ntBASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 AC007663.3-201ENST00000609632 465 ntBASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 AL162426.1-201ENST00000624141 743 ntBASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TTC39BQ5VTQ0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TTC39BQ5VTQ0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC39BQ5VTQ0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC39BQ5VTQ0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.21■□□□□ 0.02
TTC39BQ5VTQ0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC39BQ5VTQ0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 CICP12-201ENST00000455801 843 ntBASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AC021723.1-201ENST00000486306 515 ntBASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AC126915.1-201ENST00000522847 1038 ntBASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms