Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 AC005722.1-201ENST00000431878 964 ntBASIC20.87■□□□□ 0.93
ATP7AQ04656 AC133141.1-201ENST00000443015 339 ntBASIC20.87■□□□□ 0.93
ATP7AQ04656 TBC1D3P6-201ENST00000505954 962 ntBASIC20.87■□□□□ 0.93
ATP7AQ04656 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP7AQ04656 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP7AQ04656 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP7AQ04656 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP7AQ04656 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP7AQ04656 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP7AQ04656 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP7AQ04656 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 WASH7P-201ENST00000488147 1351 ntBASIC20.86■□□□□ 0.93
ATP7AQ04656 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 AC020931.1-201ENST00000589622 1346 ntBASIC20.86■□□□□ 0.93
ATP7AQ04656 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATP7AQ04656 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
ATP7AQ04656 KRT8P30-201ENST00000432100 650 ntBASIC20.86■□□□□ 0.93
ATP7AQ04656 AC079250.1-201ENST00000456046 531 ntBASIC20.86■□□□□ 0.93
ATP7AQ04656 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP7AQ04656 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP7AQ04656 AC006116.2-201ENST00000589958 988 ntBASIC20.86■□□□□ 0.93
ATP7AQ04656 KF455155.1-201ENST00000604493 303 ntBASIC20.86■□□□□ 0.93
ATP7AQ04656 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ATP7AQ04656 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP7AQ04656 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP7AQ04656 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP7AQ04656 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ATP7AQ04656 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP7AQ04656 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP7AQ04656 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP7AQ04656 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP7AQ04656 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC20.85■□□□□ 0.93
ATP7AQ04656 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.85■□□□□ 0.93
ATP7AQ04656 AC026120.2-201ENST00000617239 309 ntBASIC20.85■□□□□ 0.93
ATP7AQ04656 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP7AQ04656 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC20.85■□□□□ 0.93
ATP7AQ04656 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATP7AQ04656 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATP7AQ04656 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ATP7AQ04656 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP7AQ04656 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP7AQ04656 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP7AQ04656 RPSAP12-201ENST00000435879 888 ntBASIC20.84■□□□□ 0.93
ATP7AQ04656 BCL2L12P1-201ENST00000508390 733 ntBASIC20.84■□□□□ 0.93
ATP7AQ04656 MIR2278-201ENST00000516344 96 ntBASIC20.84■□□□□ 0.93
ATP7AQ04656 AC004801.1-201ENST00000549557 360 ntBASIC20.84■□□□□ 0.93
ATP7AQ04656 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP7AQ04656 KRT8P34-201ENST00000577607 1044 ntBASIC20.84■□□□□ 0.93
ATP7AQ04656 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms