Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 MIR1908-201ENST00000410394 80 ntBASIC13.43□□□□□ -0.26
CLDN20P56880 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 Z93015.1-201ENST00000451718 390 ntBASIC13.43□□□□□ -0.26
CLDN20P56880 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLDN20P56880 FAM86HP-204ENST00000513466 959 ntBASIC13.43□□□□□ -0.26
CLDN20P56880 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN20P56880 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN20P56880 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 AL591122.2-201ENST00000624125 1853 ntBASIC13.43□□□□□ -0.26
CLDN20P56880 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CLDN20P56880 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLDN20P56880 AC018529.2-202ENST00000611482 3087 ntBASIC13.43□□□□□ -0.26
CLDN20P56880 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN20P56880 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLDN20P56880 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLDN20P56880 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CLDN20P56880 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 MIR326-201ENST00000362220 95 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 BRWD1P1-201ENST00000401091 371 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 AL136309.1-201ENST00000403917 691 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN20P56880 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN20P56880 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 TLE1P1-201ENST00000422965 589 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 CHMP1AP1-201ENST00000445563 662 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 HIST2H2BB-201ENST00000449108 381 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN20P56880 EEF1DP1-201ENST00000585891 896 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN20P56880 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 NUTM2HP-201ENST00000442076 2498 ntBASIC13.42□□□□□ -0.26
CLDN20P56880 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN20P56880 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN20P56880 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN20P56880 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms