Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.73□□□□□ -0.05
LIMK2P53671 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK2P53671 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.73□□□□□ -0.05
LIMK2P53671 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.73□□□□□ -0.05
LIMK2P53671 AC243960.2-201ENST00000600996 747 ntBASIC14.73□□□□□ -0.05
LIMK2P53671 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.73□□□□□ -0.05
LIMK2P53671 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK2P53671 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK2P53671 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LIMK2P53671 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LIMK2P53671 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LIMK2P53671 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LIMK2P53671 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK2P53671 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK2P53671 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.73□□□□□ -0.05
LIMK2P53671 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK2P53671 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK2P53671 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.73□□□□□ -0.05
LIMK2P53671 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 AC020910.5-201ENST00000623668 1865 ntBASIC14.72□□□□□ -0.05
LIMK2P53671 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LIMK2P53671 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 TPM3P8-201ENST00000330554 643 ntBASIC14.72□□□□□ -0.05
LIMK2P53671 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.72□□□□□ -0.05
LIMK2P53671 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 GOLGA2P4-201ENST00000441462 777 ntBASIC14.72□□□□□ -0.05
LIMK2P53671 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK2P53671 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 SORD2P-201ENST00000558556 1069 ntBASIC14.72□□□□□ -0.05
LIMK2P53671 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK2P53671 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK2P53671 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 BX088702.1-201ENST00000610784 235 ntBASIC14.72□□□□□ -0.05
LIMK2P53671 AC138466.3-201ENST00000619983 221 ntBASIC14.72□□□□□ -0.05
LIMK2P53671 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LIMK2P53671 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK2P53671 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK2P53671 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK2P53671 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LIMK2P53671 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.71□□□□□ -0.05
LIMK2P53671 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.71□□□□□ -0.05
LIMK2P53671 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 MIR1247-201ENST00000408206 136 ntBASIC14.71□□□□□ -0.05
LIMK2P53671 BTBD6P1-201ENST00000412176 1267 ntBASIC14.71□□□□□ -0.05
LIMK2P53671 GPAA1P2-201ENST00000417923 928 ntBASIC14.71□□□□□ -0.05
LIMK2P53671 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.71□□□□□ -0.05
LIMK2P53671 AC006033.1-201ENST00000440505 426 ntBASIC14.71□□□□□ -0.05
LIMK2P53671 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.71□□□□□ -0.05
LIMK2P53671 ALG3P1-201ENST00000508806 1114 ntBASIC14.71□□□□□ -0.05
LIMK2P53671 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
LIMK2P53671 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms