Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
EFNA3P52797 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNA3P52797 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
EFNA3P52797 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 KRT8P21-201ENST00000430398 1491 ntBASIC13.61□□□□□ -0.23
EFNA3P52797 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
EFNA3P52797 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNA3P52797 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNA3P52797 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNA3P52797 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 PGAM1P5-201ENST00000548011 764 ntBASIC13.61□□□□□ -0.23
EFNA3P52797 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.61□□□□□ -0.23
EFNA3P52797 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNA3P52797 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 AC091812.3-201ENST00000621362 345 ntBASIC13.61□□□□□ -0.23
EFNA3P52797 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNA3P52797 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
EFNA3P52797 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNA3P52797 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.6□□□□□ -0.23
EFNA3P52797 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
EFNA3P52797 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.6□□□□□ -0.23
EFNA3P52797 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
EFNA3P52797 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 AC091046.1-201ENST00000331871 207 ntBASIC13.6□□□□□ -0.23
EFNA3P52797 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNA3P52797 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms