Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRCC3P46736 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRCC3P46736 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BRCC3P46736 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BRCC3P46736 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.42■□□□□ 0.06
BRCC3P46736 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.42■□□□□ 0.06
BRCC3P46736 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
BRCC3P46736 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 AC011498.7-201ENST00000624986 2027 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.41■□□□□ 0.06
BRCC3P46736 MIR557-201ENST00000385239 98 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
BRCC3P46736 AL807761.2-201ENST00000422849 729 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.41■□□□□ 0.06
BRCC3P46736 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.41■□□□□ 0.06
BRCC3P46736 MPRIPP1-201ENST00000452433 1089 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.41■□□□□ 0.06
BRCC3P46736 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
BRCC3P46736 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 MIR5572-201ENST00000583188 137 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.41■□□□□ 0.06
BRCC3P46736 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 AC018635.2-201ENST00000608625 364 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 AC090386.2-201ENST00000623010 1039 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 KRT8P31-201ENST00000504812 1408 ntBASIC15.41■□□□□ 0.06
BRCC3P46736 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRCC3P46736 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRCC3P46736 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.41■□□□□ 0.06
BRCC3P46736 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 LAP3P2-201ENST00000454686 1454 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 AP000356.3-201ENST00000382243 753 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
BRCC3P46736 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.4■□□□□ 0.06
BRCC3P46736 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.4■□□□□ 0.06
BRCC3P46736 DUTP3-201ENST00000450025 415 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.4■□□□□ 0.06
BRCC3P46736 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
BRCC3P46736 AC138894.2-201ENST00000602838 371 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 AC007326.1-201ENST00000604539 458 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 AC103810.10-201ENST00000606504 343 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 AC073352.2-201ENST00000609385 439 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.4■□□□□ 0.06
BRCC3P46736 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 AL805961.1-201ENST00000642026 753 ntBASIC15.4■□□□□ 0.06
BRCC3P46736 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRCC3P46736 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
BRCC3P46736 AC113367.3-201ENST00000508316 1912 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms