Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.18□□□□□ -0.3
APOBEC1P41238 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 MIR663B-201ENST00000408361 115 ntBASIC13.18□□□□□ -0.3
APOBEC1P41238 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.18□□□□□ -0.3
APOBEC1P41238 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.18□□□□□ -0.3
APOBEC1P41238 RPL13AP20-201ENST00000459725 609 ntBASIC13.18□□□□□ -0.3
APOBEC1P41238 FAM86HP-204ENST00000513466 959 ntBASIC13.18□□□□□ -0.3
APOBEC1P41238 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.18□□□□□ -0.3
APOBEC1P41238 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.18□□□□□ -0.3
APOBEC1P41238 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APOBEC1P41238 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.18□□□□□ -0.3
APOBEC1P41238 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
APOBEC1P41238 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.18□□□□□ -0.3
APOBEC1P41238 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
APOBEC1P41238 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 AC012617.1-204ENST00000586340 2305 ntBASIC13.18□□□□□ -0.3
APOBEC1P41238 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 KRT8P29-201ENST00000420409 1371 ntBASIC13.18□□□□□ -0.3
APOBEC1P41238 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
APOBEC1P41238 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOBEC1P41238 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
APOBEC1P41238 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
APOBEC1P41238 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
APOBEC1P41238 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 POM121L10P-201ENST00000436994 1285 ntBASIC13.17□□□□□ -0.3
APOBEC1P41238 RPS2P32-201ENST00000439199 892 ntBASIC13.17□□□□□ -0.3
APOBEC1P41238 GOLGA2P4-201ENST00000441462 777 ntBASIC13.17□□□□□ -0.3
APOBEC1P41238 ST13P19-201ENST00000442505 1124 ntBASIC13.17□□□□□ -0.3
APOBEC1P41238 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.17□□□□□ -0.3
APOBEC1P41238 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.17□□□□□ -0.3
APOBEC1P41238 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.17□□□□□ -0.3
APOBEC1P41238 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOBEC1P41238 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
APOBEC1P41238 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.17□□□□□ -0.3
APOBEC1P41238 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.17□□□□□ -0.3
APOBEC1P41238 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOBEC1P41238 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOBEC1P41238 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms