Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT9P35527 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
KRT9P35527 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16■□□□□ 0.15
KRT9P35527 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16■□□□□ 0.15
KRT9P35527 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16■□□□□ 0.15
KRT9P35527 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16■□□□□ 0.15
KRT9P35527 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 RN7SL692P-201ENST00000464677 288 ntBASIC16■□□□□ 0.15
KRT9P35527 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
KRT9P35527 AC068587.3-201ENST00000526613 355 ntBASIC16■□□□□ 0.15
KRT9P35527 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16■□□□□ 0.15
KRT9P35527 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
KRT9P35527 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16■□□□□ 0.15
KRT9P35527 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16■□□□□ 0.15
KRT9P35527 AC145423.3-201ENST00000615987 467 ntBASIC16■□□□□ 0.15
KRT9P35527 AL358472.5-202ENST00000641448 1267 ntBASIC16■□□□□ 0.15
KRT9P35527 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16■□□□□ 0.15
KRT9P35527 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 AGAP10P-201ENST00000454844 2418 ntBASIC16■□□□□ 0.15
KRT9P35527 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
KRT9P35527 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT9P35527 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16■□□□□ 0.15
KRT9P35527 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16■□□□□ 0.15
KRT9P35527 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
KRT9P35527 KHSRPP1-201ENST00000427983 1768 ntBASIC16■□□□□ 0.15
KRT9P35527 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16■□□□□ 0.15
KRT9P35527 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.99■□□□□ 0.15
KRT9P35527 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 AC007389.4-201ENST00000454674 793 ntBASIC15.99■□□□□ 0.15
KRT9P35527 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 RN7SL837P-201ENST00000463010 287 ntBASIC15.99■□□□□ 0.15
KRT9P35527 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.99■□□□□ 0.15
KRT9P35527 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 AP001002.3-201ENST00000623482 206 ntBASIC15.99■□□□□ 0.15
KRT9P35527 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT9P35527 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT9P35527 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT9P35527 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
KRT9P35527 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT9P35527 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT9P35527 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT9P35527 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT9P35527 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT9P35527 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT9P35527 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT9P35527 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT9P35527 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT9P35527 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms