Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
USP6P35125 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP6P35125 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
USP6P35125 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC19.19■□□□□ 0.66
USP6P35125 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC19.19■□□□□ 0.66
USP6P35125 AC244197.1-201ENST00000456494 951 ntBASIC19.19■□□□□ 0.66
USP6P35125 BPIFB5P-201ENST00000457066 1099 ntBASIC19.19■□□□□ 0.66
USP6P35125 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP6P35125 AC008026.2-201ENST00000495438 348 ntBASIC19.19■□□□□ 0.66
USP6P35125 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.19■□□□□ 0.66
USP6P35125 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.19■□□□□ 0.66
USP6P35125 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.19■□□□□ 0.66
USP6P35125 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC19.19■□□□□ 0.66
USP6P35125 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 AC015909.5-201ENST00000624336 2266 ntBASIC19.19■□□□□ 0.66
USP6P35125 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP6P35125 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC19.19■□□□□ 0.66
USP6P35125 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP6P35125 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
USP6P35125 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
USP6P35125 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.18■□□□□ 0.66
USP6P35125 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 USP17L6P-201ENST00000382470 1197 ntBASIC19.18■□□□□ 0.66
USP6P35125 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC19.18■□□□□ 0.66
USP6P35125 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC19.18■□□□□ 0.66
USP6P35125 AC026470.1-201ENST00000478038 846 ntBASIC19.18■□□□□ 0.66
USP6P35125 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 AC093300.1-201ENST00000510368 1201 ntBASIC19.18■□□□□ 0.66
USP6P35125 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC19.18■□□□□ 0.66
USP6P35125 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.18■□□□□ 0.66
USP6P35125 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.18■□□□□ 0.66
USP6P35125 AC132825.4-202ENST00000578792 434 ntBASIC19.18■□□□□ 0.66
USP6P35125 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19.18■□□□□ 0.66
USP6P35125 AC113367.3-201ENST00000508316 1912 ntBASIC19.18■□□□□ 0.66
USP6P35125 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 AC004554.1-201ENST00000422830 1468 ntBASIC19.18■□□□□ 0.66
USP6P35125 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
USP6P35125 AP001267.2-201ENST00000532619 2086 ntBASIC19.18■□□□□ 0.66
USP6P35125 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP6P35125 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.18■□□□□ 0.66
USP6P35125 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC19.17■□□□□ 0.66
USP6P35125 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.17■□□□□ 0.66
USP6P35125 CYP4F36P-201ENST00000589193 186 ntBASIC19.17■□□□□ 0.66
USP6P35125 AL049840.2-201ENST00000602722 535 ntBASIC19.17■□□□□ 0.66
USP6P35125 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
USP6P35125 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC19.17■□□□□ 0.66
USP6P35125 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms