Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 KRT8P35-201ENST00000483942 1338 ntBASIC10.78□□□□□ -0.68
CKS2P33552 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CKS2P33552 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS2P33552 AL035456.1-201ENST00000456064 1369 ntBASIC10.77□□□□□ -0.68
CKS2P33552 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
CKS2P33552 AL136172.1-201ENST00000598590 1394 ntBASIC10.77□□□□□ -0.68
CKS2P33552 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
CKS2P33552 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS2P33552 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.77□□□□□ -0.68
CKS2P33552 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS2P33552 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS2P33552 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS2P33552 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS2P33552 AC104109.2-201ENST00000602919 1418 ntBASIC10.77□□□□□ -0.68
CKS2P33552 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC10.77□□□□□ -0.68
CKS2P33552 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CKS2P33552 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CKS2P33552 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.77□□□□□ -0.69
CKS2P33552 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.77□□□□□ -0.69
CKS2P33552 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.77□□□□□ -0.69
CKS2P33552 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 AC084121.4-201ENST00000641598 221 ntBASIC10.77□□□□□ -0.69
CKS2P33552 AF228730.8-201ENST00000642140 221 ntBASIC10.77□□□□□ -0.69
CKS2P33552 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 NCLP1-201ENST00000445357 1963 ntBASIC10.77□□□□□ -0.69
CKS2P33552 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS2P33552 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS2P33552 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
CKS2P33552 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS2P33552 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.76□□□□□ -0.69
CKS2P33552 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS2P33552 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS2P33552 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS2P33552 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS2P33552 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.76□□□□□ -0.69
CKS2P33552 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS2P33552 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS2P33552 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms