Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.71□□□□□ -0.21
CHMP24386 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.71□□□□□ -0.21
CHMP24386 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.71□□□□□ -0.21
CHMP24386 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.71□□□□□ -0.21
CHMP24386 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 AC119751.2-201ENST00000504529 210 ntBASIC13.71□□□□□ -0.21
CHMP24386 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.71□□□□□ -0.21
CHMP24386 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.71□□□□□ -0.21
CHMP24386 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.71□□□□□ -0.21
CHMP24386 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.71□□□□□ -0.21
CHMP24386 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CHMP24386 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.71□□□□□ -0.21
CHMP24386 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.71□□□□□ -0.21
CHMP24386 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.71□□□□□ -0.21
CHMP24386 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.71□□□□□ -0.21
CHMP24386 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
CHMP24386 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CHMP24386 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CHMP24386 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.71□□□□□ -0.22
CHMP24386 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.71□□□□□ -0.22
CHMP24386 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CHMP24386 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.71□□□□□ -0.22
CHMP24386 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.71□□□□□ -0.22
CHMP24386 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHMP24386 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 AC006001.1-201ENST00000325130 474 ntBASIC13.7□□□□□ -0.22
CHMP24386 TPM3P8-201ENST00000330554 643 ntBASIC13.7□□□□□ -0.22
CHMP24386 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CHMP24386 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.7□□□□□ -0.22
CHMP24386 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 EIF3FP3-201ENST00000434851 1086 ntBASIC13.7□□□□□ -0.22
CHMP24386 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.7□□□□□ -0.22
CHMP24386 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.7□□□□□ -0.22
CHMP24386 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.7□□□□□ -0.22
CHMP24386 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 ENPP7P14-201ENST00000621765 1040 ntBASIC13.7□□□□□ -0.22
CHMP24386 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.7□□□□□ -0.22
CHMP24386 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHMP24386 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHMP24386 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHMP24386 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.69□□□□□ -0.22
CHMP24386 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.69□□□□□ -0.22
CHMP24386 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms