Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.86□□□□□ -0.03
COL9A1P20849 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.86□□□□□ -0.03
COL9A1P20849 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
COL9A1P20849 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.86□□□□□ -0.03
COL9A1P20849 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
COL9A1P20849 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
COL9A1P20849 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.86□□□□□ -0.03
COL9A1P20849 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL9A1P20849 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
COL9A1P20849 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL9A1P20849 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
COL9A1P20849 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
COL9A1P20849 MTATP6P17-201ENST00000431030 672 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 CDKN2A-AS1-201ENST00000441769 823 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 AC092896.1-201ENST00000465850 380 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 ALG1L15P-201ENST00000482834 794 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 AC008026.2-201ENST00000495438 348 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 AL158211.1-201ENST00000566763 763 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL9A1P20849 MIR3188-201ENST00000583494 85 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 AC112187.3-201ENST00000607844 408 ntBASIC14.85□□□□□ -0.03
COL9A1P20849 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.85□□□□□ -0.03
COL9A1P20849 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL9A1P20849 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.85□□□□□ -0.03
COL9A1P20849 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.85□□□□□ -0.03
COL9A1P20849 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL9A1P20849 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.84□□□□□ -0.03
COL9A1P20849 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.84□□□□□ -0.03
COL9A1P20849 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
COL9A1P20849 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.84□□□□□ -0.03
COL9A1P20849 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.84□□□□□ -0.03
COL9A1P20849 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.84□□□□□ -0.03
COL9A1P20849 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC14.84□□□□□ -0.03
COL9A1P20849 AC104961.1-201ENST00000427605 771 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 RPL18AP15-201ENST00000430258 517 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC14.84□□□□□ -0.03
COL9A1P20849 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC14.84□□□□□ -0.03
COL9A1P20849 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC14.84□□□□□ -0.03
COL9A1P20849 AC023968.2-201ENST00000560593 1049 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.84□□□□□ -0.03
COL9A1P20849 RN7SL300P-201ENST00000582522 318 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC14.84□□□□□ -0.03
COL9A1P20849 AC109809.1-201ENST00000619665 545 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 AC090506.2-201ENST00000624521 419 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC14.84□□□□□ -0.03
COL9A1P20849 AC006927.4-201ENST00000639187 543 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.84□□□□□ -0.03
COL9A1P20849 AC011270.2-201ENST00000624293 2550 ntBASIC14.84□□□□□ -0.03
COL9A1P20849 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL9A1P20849 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
COL9A1P20849 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.84□□□□□ -0.03
COL9A1P20849 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
COL9A1P20849 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms