Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
ATF3P18847 HNRNPA1P21-201ENST00000424115 961 ntBASIC19.58■□□□□ 0.72
ATF3P18847 AL161932.2-201ENST00000435436 679 ntBASIC19.58■□□□□ 0.72
ATF3P18847 NALT1-202ENST00000450304 437 ntTSL 3 BASIC19.58■□□□□ 0.72
ATF3P18847 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC19.58■□□□□ 0.72
ATF3P18847 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC19.58■□□□□ 0.72
ATF3P18847 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC19.58■□□□□ 0.72
ATF3P18847 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC19.58■□□□□ 0.72
ATF3P18847 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ATF3P18847 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.58■□□□□ 0.72
ATF3P18847 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ATF3P18847 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ATF3P18847 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.58■□□□□ 0.72
ATF3P18847 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.58■□□□□ 0.72
ATF3P18847 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.58■□□□□ 0.72
ATF3P18847 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 LTB4R2-202ENST00000528054 3092 ntBASIC19.57■□□□□ 0.72
ATF3P18847 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.57■□□□□ 0.72
ATF3P18847 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
ATF3P18847 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.57■□□□□ 0.72
ATF3P18847 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC19.57■□□□□ 0.72
ATF3P18847 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ATF3P18847 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC19.57■□□□□ 0.72
ATF3P18847 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC19.57■□□□□ 0.72
ATF3P18847 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 AC147876.1-201ENST00000504408 322 ntBASIC19.57■□□□□ 0.72
ATF3P18847 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 ANKRD26P1-203ENST00000569528 966 ntBASIC19.57■□□□□ 0.72
ATF3P18847 AC126755.5-201ENST00000622756 267 ntBASIC19.57■□□□□ 0.72
ATF3P18847 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.57■□□□□ 0.72
ATF3P18847 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATF3P18847 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATF3P18847 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATF3P18847 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF3P18847 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.56■□□□□ 0.72
ATF3P18847 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 AC020931.1-201ENST00000589622 1346 ntBASIC19.56■□□□□ 0.72
ATF3P18847 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
ATF3P18847 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
ATF3P18847 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF3P18847 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATF3P18847 AL121949.3-201ENST00000406684 385 ntBASIC19.56■□□□□ 0.72
ATF3P18847 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.56■□□□□ 0.72
ATF3P18847 AC098657.1-201ENST00000416270 1135 ntBASIC19.56■□□□□ 0.72
ATF3P18847 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF3P18847 FAM197Y6-201ENST00000420524 766 ntBASIC19.56■□□□□ 0.72
ATF3P18847 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.56■□□□□ 0.72
ATF3P18847 BMF-206ENST00000558774 671 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF3P18847 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF3P18847 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF3P18847 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF3P18847 AC132825.4-202ENST00000578792 434 ntBASIC19.56■□□□□ 0.72
ATF3P18847 RN7SL524P-201ENST00000581152 300 ntBASIC19.56■□□□□ 0.72
ATF3P18847 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF3P18847 PRMT1P1-201ENST00000604252 1009 ntBASIC19.56■□□□□ 0.72
ATF3P18847 AC004466.2-201ENST00000614749 516 ntBASIC19.56■□□□□ 0.72
ATF3P18847 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF3P18847 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 TBC1D27-202ENST00000424239 1573 ntBASIC19.56■□□□□ 0.72
ATF3P18847 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.56■□□□□ 0.72
ATF3P18847 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATF3P18847 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATF3P18847 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF3P18847 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF3P18847 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.55■□□□□ 0.72
ATF3P18847 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 KRT8P43-201ENST00000406052 1458 ntBASIC19.55■□□□□ 0.72
ATF3P18847 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF3P18847 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms