Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 AC111170.3-201ENST00000624282 2464 ntBASIC15.32■□□□□ 0.04
RARAP10276 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RARAP10276 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.31■□□□□ 0.04
RARAP10276 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RARAP10276 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.31■□□□□ 0.04
RARAP10276 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.31■□□□□ 0.04
RARAP10276 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.31■□□□□ 0.04
RARAP10276 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.31■□□□□ 0.04
RARAP10276 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 AP000812.2-201ENST00000538934 718 ntBASIC15.31■□□□□ 0.04
RARAP10276 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.31■□□□□ 0.04
RARAP10276 AL358472.3-201ENST00000608147 415 ntBASIC15.31■□□□□ 0.04
RARAP10276 AC012645.4-201ENST00000610691 1061 ntBASIC15.31■□□□□ 0.04
RARAP10276 AL589935.2-201ENST00000616471 1231 ntBASIC15.31■□□□□ 0.04
RARAP10276 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 AC015818.8-201ENST00000587907 1519 ntBASIC15.31■□□□□ 0.04
RARAP10276 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RARAP10276 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RARAP10276 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 KRT8P28-201ENST00000433288 1390 ntBASIC15.3■□□□□ 0.04
RARAP10276 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 PDIA3P1-201ENST00000471856 1510 ntBASIC15.3■□□□□ 0.04
RARAP10276 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 KRT8P4-201ENST00000509735 1454 ntBASIC15.3■□□□□ 0.04
RARAP10276 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 SORD2P-201ENST00000558556 1069 ntBASIC15.3■□□□□ 0.04
RARAP10276 C2orf69P2-201ENST00000562032 1123 ntBASIC15.3■□□□□ 0.04
RARAP10276 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms