Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 AC012617.1-204ENST00000586340 2305 ntBASIC13.21□□□□□ -0.3
FREM3P0C091 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
FREM3P0C091 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
FREM3P0C091 UPF3AP2-201ENST00000457924 1132 ntBASIC13.21□□□□□ -0.3
FREM3P0C091 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.3
FREM3P0C091 MIR3907-201ENST00000579424 151 ntBASIC13.21□□□□□ -0.3
FREM3P0C091 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.21□□□□□ -0.3
FREM3P0C091 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
FREM3P0C091 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
FREM3P0C091 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
FREM3P0C091 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 KRT8P19-201ENST00000551916 1455 ntBASIC13.2□□□□□ -0.3
FREM3P0C091 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FREM3P0C091 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
FREM3P0C091 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.2□□□□□ -0.3
FREM3P0C091 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.2□□□□□ -0.3
FREM3P0C091 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.2□□□□□ -0.3
FREM3P0C091 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FREM3P0C091 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.2□□□□□ -0.3
FREM3P0C091 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.2□□□□□ -0.3
FREM3P0C091 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.2□□□□□ -0.3
FREM3P0C091 AC133540.1-201ENST00000620845 1019 ntBASIC13.2□□□□□ -0.3
FREM3P0C091 AL162426.1-201ENST00000624141 743 ntBASIC13.2□□□□□ -0.3
FREM3P0C091 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.2□□□□□ -0.3
FREM3P0C091 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FREM3P0C091 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM3P0C091 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM3P0C091 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.19□□□□□ -0.3
FREM3P0C091 CICP12-201ENST00000455801 843 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 AC012618.1-201ENST00000461223 412 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.19□□□□□ -0.3
FREM3P0C091 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.19□□□□□ -0.3
FREM3P0C091 FGFR3P5-201ENST00000564496 886 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FREM3P0C091 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 XBP1P1-201ENST00000436573 652 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms