Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HTR1AP08908 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1AP08908 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1AP08908 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HTR1AP08908 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.33□□□□□ -0.28
HTR1AP08908 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR1AP08908 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR1AP08908 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.33□□□□□ -0.28
HTR1AP08908 AC069262.1-201ENST00000539058 672 ntBASIC13.33□□□□□ -0.28
HTR1AP08908 TIMM17BP1-201ENST00000545713 516 ntBASIC13.33□□□□□ -0.28
HTR1AP08908 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR1AP08908 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR1AP08908 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1AP08908 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.33□□□□□ -0.28
HTR1AP08908 AL138828.2-201ENST00000615812 383 ntBASIC13.33□□□□□ -0.28
HTR1AP08908 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.33□□□□□ -0.28
HTR1AP08908 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1AP08908 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1AP08908 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.33□□□□□ -0.28
HTR1AP08908 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1AP08908 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HTR1AP08908 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
HTR1AP08908 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.32□□□□□ -0.28
HTR1AP08908 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HTR1AP08908 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.32□□□□□ -0.28
HTR1AP08908 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 AL928654.5-201ENST00000624831 2501 ntBASIC13.32□□□□□ -0.28
HTR1AP08908 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.32□□□□□ -0.28
HTR1AP08908 AL353779.1-201ENST00000434793 351 ntBASIC13.32□□□□□ -0.28
HTR1AP08908 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.32□□□□□ -0.28
HTR1AP08908 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.32□□□□□ -0.28
HTR1AP08908 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.32□□□□□ -0.28
HTR1AP08908 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
HTR1AP08908 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HTR1AP08908 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1AP08908 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HTR1AP08908 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms