Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.53□□□□□ -0.56
TRGV3P03979 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
TRGV3P03979 RNA5SP412-201ENST00000516234 123 ntBASIC11.53□□□□□ -0.56
TRGV3P03979 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.53□□□□□ -0.56
TRGV3P03979 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 RN7SL560P-201ENST00000577943 264 ntBASIC11.53□□□□□ -0.56
TRGV3P03979 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.53□□□□□ -0.56
TRGV3P03979 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 EEF1DP1-201ENST00000585891 896 ntBASIC11.53□□□□□ -0.56
TRGV3P03979 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.53□□□□□ -0.56
TRGV3P03979 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.53□□□□□ -0.56
TRGV3P03979 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV3P03979 AC244157.2-201ENST00000616239 1006 ntBASIC11.53□□□□□ -0.56
TRGV3P03979 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV3P03979 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV3P03979 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TRGV3P03979 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 AGGF1P1-201ENST00000509500 2073 ntBASIC11.53□□□□□ -0.56
TRGV3P03979 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
TRGV3P03979 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV3P03979 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
TRGV3P03979 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV3P03979 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
TRGV3P03979 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
TRGV3P03979 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
TRGV3P03979 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.52□□□□□ -0.56
TRGV3P03979 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.52□□□□□ -0.56
TRGV3P03979 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 SHC1P1-201ENST00000425230 1745 ntBASIC11.52□□□□□ -0.56
TRGV3P03979 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
TRGV3P03979 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV3P03979 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
TRGV3P03979 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
TRGV3P03979 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.52□□□□□ -0.57
TRGV3P03979 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.52□□□□□ -0.57
TRGV3P03979 MTX1P1-201ENST00000440904 838 ntBASIC11.52□□□□□ -0.57
TRGV3P03979 Z93015.1-201ENST00000451718 390 ntBASIC11.52□□□□□ -0.57
TRGV3P03979 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.52□□□□□ -0.57
TRGV3P03979 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV3P03979 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.52□□□□□ -0.57
TRGV3P03979 AC008825.2-201ENST00000603374 718 ntBASIC11.52□□□□□ -0.57
TRGV3P03979 AC027601.3-201ENST00000622907 509 ntBASIC11.52□□□□□ -0.57
TRGV3P03979 AP001002.3-201ENST00000623482 206 ntBASIC11.52□□□□□ -0.57
TRGV3P03979 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV3P03979 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV3P03979 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
TRGV3P03979 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 AC005840.4-201ENST00000541242 2494 ntBASIC11.52□□□□□ -0.57
TRGV3P03979 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV3P03979 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms