Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 BAK1P1-201ENST00000317045 636 ntBASIC15.68■□□□□ 0.1
CHRNA1P02708 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 KRT18P66-201ENST00000452970 1269 ntBASIC15.68■□□□□ 0.1
CHRNA1P02708 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA1P02708 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 AC068867.1-201ENST00000559855 150 ntBASIC15.68■□□□□ 0.1
CHRNA1P02708 NDUFB10P1-201ENST00000567319 521 ntBASIC15.68■□□□□ 0.1
CHRNA1P02708 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA1P02708 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 SIGLEC22P-201ENST00000599104 714 ntBASIC15.68■□□□□ 0.1
CHRNA1P02708 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.68■□□□□ 0.1
CHRNA1P02708 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA1P02708 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA1P02708 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA1P02708 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 DBET-201ENST00000630918 3363 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA1P02708 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 RN7SKP109-201ENST00000410592 316 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA1P02708 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 ALG1L6P-201ENST00000515248 758 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 OR5BD1P-201ENST00000532527 817 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHRNA1P02708 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.67■□□□□ 0.1
CHRNA1P02708 AL021707.6-201ENST00000609212 491 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA1P02708 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA1P02708 AC064801.2-201ENST00000625052 1303 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA1P02708 CICP14-201ENST00000629111 2732 ntBASIC15.67■□□□□ 0.1
CHRNA1P02708 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms