Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
KRT6AP02538 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
KRT6AP02538 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
KRT6AP02538 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.19□□□□□ -0.14
KRT6AP02538 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.19□□□□□ -0.14
KRT6AP02538 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.19□□□□□ -0.14
KRT6AP02538 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.19□□□□□ -0.14
KRT6AP02538 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.19□□□□□ -0.14
KRT6AP02538 AC106820.3-201ENST00000561653 397 ntBASIC14.19□□□□□ -0.14
KRT6AP02538 AC015936.2-201ENST00000593177 259 ntBASIC14.19□□□□□ -0.14
KRT6AP02538 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.19□□□□□ -0.14
KRT6AP02538 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KRT6AP02538 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KRT6AP02538 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KRT6AP02538 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 HSPA8P5-201ENST00000456928 2069 ntBASIC14.18□□□□□ -0.14
KRT6AP02538 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KRT6AP02538 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT6AP02538 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.18□□□□□ -0.14
KRT6AP02538 RNA5SP486-201ENST00000515961 83 ntBASIC14.18□□□□□ -0.14
KRT6AP02538 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.18□□□□□ -0.14
KRT6AP02538 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.18□□□□□ -0.14
KRT6AP02538 ECM1P1-201ENST00000604092 1279 ntBASIC14.18□□□□□ -0.14
KRT6AP02538 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KRT6AP02538 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
KRT6AP02538 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms