Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC020910.6-201ENST00000623084 1459 ntBASIC20.56■□□□□ 0.88
POLR1AO95602 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR1AO95602 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
POLR1AO95602 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.56■□□□□ 0.88
POLR1AO95602 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC20.56■□□□□ 0.88
POLR1AO95602 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 BCRP4-201ENST00000506079 804 ntBASIC20.56■□□□□ 0.88
POLR1AO95602 AC090136.2-201ENST00000517809 420 ntBASIC20.56■□□□□ 0.88
POLR1AO95602 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
POLR1AO95602 AC090386.2-201ENST00000623010 1039 ntBASIC20.56■□□□□ 0.88
POLR1AO95602 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.55■□□□□ 0.88
POLR1AO95602 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
POLR1AO95602 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR1AO95602 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
POLR1AO95602 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 NQO2-204ENST00000380454 851 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR1AO95602 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC20.55■□□□□ 0.88
POLR1AO95602 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.55■□□□□ 0.88
POLR1AO95602 AC004466.2-201ENST00000614749 516 ntBASIC20.55■□□□□ 0.88
POLR1AO95602 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR1AO95602 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR1AO95602 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1AO95602 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR1AO95602 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
POLR1AO95602 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1AO95602 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC20.54■□□□□ 0.88
POLR1AO95602 AC015688.4-201ENST00000580780 1647 ntBASIC20.54■□□□□ 0.88
POLR1AO95602 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
POLR1AO95602 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1AO95602 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 AP000354.1-201ENST00000396982 456 ntBASIC20.54■□□□□ 0.88
POLR1AO95602 IFNWP2-201ENST00000431203 580 ntBASIC20.54■□□□□ 0.88
POLR1AO95602 AC027612.2-202ENST00000445955 1199 ntBASIC20.54■□□□□ 0.88
POLR1AO95602 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1AO95602 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1AO95602 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC20.54■□□□□ 0.88
POLR1AO95602 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
POLR1AO95602 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1AO95602 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
POLR1AO95602 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.53■□□□□ 0.88
POLR1AO95602 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR1AO95602 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR1AO95602 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR1AO95602 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1AO95602 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR1AO95602 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
POLR1AO95602 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR1AO95602 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC20.53■□□□□ 0.88
POLR1AO95602 RPL3P2-204ENST00000413027 1203 ntBASIC20.53■□□□□ 0.88
POLR1AO95602 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 AC025186.1-201ENST00000478174 870 ntBASIC20.53■□□□□ 0.88
POLR1AO95602 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1AO95602 AC113347.2-201ENST00000512350 279 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms