Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.88■□□□□ 0.45
CACNA1FO60840 RPL8P2-201ENST00000430538 502 ntBASIC17.88■□□□□ 0.45
CACNA1FO60840 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNA1FO60840 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNA1FO60840 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNA1FO60840 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 AC005041.3-201ENST00000606287 649 ntBASIC17.88■□□□□ 0.45
CACNA1FO60840 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CACNA1FO60840 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNA1FO60840 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CACNA1FO60840 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CACNA1FO60840 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 FXNP2-201ENST00000411625 547 ntBASIC17.88■□□□□ 0.45
CACNA1FO60840 RPL18AP3-201ENST00000462885 528 ntBASIC17.88■□□□□ 0.45
CACNA1FO60840 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1FO60840 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CACNA1FO60840 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.87■□□□□ 0.45
CACNA1FO60840 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CACNA1FO60840 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CACNA1FO60840 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CACNA1FO60840 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CACNA1FO60840 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.87■□□□□ 0.45
CACNA1FO60840 AC005722.1-201ENST00000431878 964 ntBASIC17.87■□□□□ 0.45
CACNA1FO60840 AC078991.1-201ENST00000437297 610 ntBASIC17.87■□□□□ 0.45
CACNA1FO60840 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.87■□□□□ 0.45
CACNA1FO60840 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.87■□□□□ 0.45
CACNA1FO60840 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.87■□□□□ 0.45
CACNA1FO60840 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.87■□□□□ 0.45
CACNA1FO60840 AC145285.5-201ENST00000562217 361 ntBASIC17.87■□□□□ 0.45
CACNA1FO60840 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 SPCS2P2-201ENST00000603270 608 ntBASIC17.87■□□□□ 0.45
CACNA1FO60840 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 AL353726.2-201ENST00000623259 884 ntBASIC17.87■□□□□ 0.45
CACNA1FO60840 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.87■□□□□ 0.45
CACNA1FO60840 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CACNA1FO60840 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.87■□□□□ 0.45
CACNA1FO60840 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 KRT8P18-201ENST00000413425 1445 ntBASIC17.87■□□□□ 0.45
CACNA1FO60840 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CACNA1FO60840 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.86■□□□□ 0.45
CACNA1FO60840 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.86■□□□□ 0.45
CACNA1FO60840 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.86■□□□□ 0.45
CACNA1FO60840 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.86■□□□□ 0.45
CACNA1FO60840 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.86■□□□□ 0.45
CACNA1FO60840 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
CACNA1FO60840 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.86■□□□□ 0.45
CACNA1FO60840 AC007952.4-201ENST00000573866 637 ntBASIC17.86■□□□□ 0.45
CACNA1FO60840 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.86■□□□□ 0.45
CACNA1FO60840 AC107464.3-201ENST00000609172 737 ntBASIC17.86■□□□□ 0.45
CACNA1FO60840 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CACNA1FO60840 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CACNA1FO60840 AC007686.3-201ENST00000619017 3487 ntBASIC17.86■□□□□ 0.45
CACNA1FO60840 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 GRK6P1-201ENST00000400595 1711 ntBASIC17.86■□□□□ 0.45
CACNA1FO60840 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CACNA1FO60840 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CACNA1FO60840 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.86■□□□□ 0.45
CACNA1FO60840 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms