Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.39■□□□□ 0.22
CHMP2AO43633 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP2AO43633 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 AC068418.2-201ENST00000577309 3703 ntBASIC16.39■□□□□ 0.21
CHMP2AO43633 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 BCYRN1-201ENST00000418539 200 ntBASIC16.39■□□□□ 0.21
CHMP2AO43633 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 AC125604.1-201ENST00000496255 707 ntBASIC16.39■□□□□ 0.21
CHMP2AO43633 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 AC009779.1-201ENST00000551138 283 ntBASIC16.39■□□□□ 0.21
CHMP2AO43633 AC027237.1-201ENST00000560942 655 ntBASIC16.39■□□□□ 0.21
CHMP2AO43633 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 AC092299.1-201ENST00000632679 757 ntBASIC16.39■□□□□ 0.21
CHMP2AO43633 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP2AO43633 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP2AO43633 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP2AO43633 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.38■□□□□ 0.21
CHMP2AO43633 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.38■□□□□ 0.21
CHMP2AO43633 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 CYP46A4P-201ENST00000414953 267 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 ACTG1P2-201ENST00000415776 1125 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 ACTG1P11-201ENST00000425411 1125 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 SPTLC1P5-201ENST00000450718 252 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 TPT1P11-201ENST00000458482 498 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.38■□□□□ 0.21
CHMP2AO43633 AP000346.4-201ENST00000614827 381 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CHMP2AO43633 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CHMP2AO43633 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 AC018629.1-201ENST00000623381 1736 ntBASIC16.38■□□□□ 0.21
CHMP2AO43633 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CHMP2AO43633 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP2AO43633 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP2AO43633 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.37■□□□□ 0.21
CHMP2AO43633 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP2AO43633 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHMP2AO43633 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms