Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.82□□□□□ -0.04
RIPK2O43353 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.82□□□□□ -0.04
RIPK2O43353 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.82□□□□□ -0.04
RIPK2O43353 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.82□□□□□ -0.04
RIPK2O43353 ALG3P1-201ENST00000508806 1114 ntBASIC14.82□□□□□ -0.04
RIPK2O43353 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.82□□□□□ -0.04
RIPK2O43353 IGHV3-42-201ENST00000520410 361 ntBASIC14.82□□□□□ -0.04
RIPK2O43353 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.82□□□□□ -0.04
RIPK2O43353 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.82□□□□□ -0.04
RIPK2O43353 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.82□□□□□ -0.04
RIPK2O43353 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.82□□□□□ -0.04
RIPK2O43353 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.82□□□□□ -0.04
RIPK2O43353 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RIPK2O43353 CLUHP2-201ENST00000426660 1303 ntBASIC14.82□□□□□ -0.04
RIPK2O43353 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RIPK2O43353 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RIPK2O43353 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RIPK2O43353 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.82□□□□□ -0.04
RIPK2O43353 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.81□□□□□ -0.04
RIPK2O43353 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.81□□□□□ -0.04
RIPK2O43353 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.81□□□□□ -0.04
RIPK2O43353 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RIPK2O43353 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 USP17L6P-201ENST00000382470 1197 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RIPK2O43353 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.81□□□□□ -0.04
RIPK2O43353 ARSEP1-201ENST00000420443 635 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 AL442647.2-201ENST00000429864 857 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 AC004890.2-204ENST00000481968 304 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 MESTP3-201ENST00000503460 968 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.81□□□□□ -0.04
RIPK2O43353 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 AC027237.1-201ENST00000560942 655 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 AL359711.2-201ENST00000563105 872 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
RIPK2O43353 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
RIPK2O43353 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.81□□□□□ -0.04
RIPK2O43353 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.81□□□□□ -0.04
RIPK2O43353 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RIPK2O43353 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RIPK2O43353 PCDHB18P-202ENST00000526308 3197 ntBASIC14.81□□□□□ -0.04
RIPK2O43353 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.81□□□□□ -0.04
RIPK2O43353 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RIPK2O43353 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RIPK2O43353 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RIPK2O43353 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RIPK2O43353 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RIPK2O43353 AL391647.1-201ENST00000395664 511 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms