Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.52■□□□□ 0.07
RCCD1A6NED2 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.52■□□□□ 0.07
RCCD1A6NED2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RCCD1A6NED2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCCD1A6NED2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RCCD1A6NED2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RCCD1A6NED2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RCCD1A6NED2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 AC126755.1-201ENST00000525846 6405 ntBASIC15.51■□□□□ 0.07
RCCD1A6NED2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 MIR661-201ENST00000384842 89 ntBASIC15.51■□□□□ 0.07
RCCD1A6NED2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CYMP-203ENST00000474680 1263 ntBASIC15.51■□□□□ 0.07
RCCD1A6NED2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 KATNBL1P4-201ENST00000503545 918 ntBASIC15.51■□□□□ 0.07
RCCD1A6NED2 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.51■□□□□ 0.07
RCCD1A6NED2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RCCD1A6NED2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.51■□□□□ 0.07
RCCD1A6NED2 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC106820.3-201ENST00000561653 397 ntBASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC008494.3-201ENST00000606615 944 ntBASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC009118.2-201ENST00000613275 655 ntBASIC15.5■□□□□ 0.07
RCCD1A6NED2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RCCD1A6NED2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.5■□□□□ 0.07
RCCD1A6NED2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCCD1A6NED2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RCCD1A6NED2 AL391825.1-201ENST00000457671 1364 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms