Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.04
RAI2Q9Y5P3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AC004898.1-201ENST00000451057 766 ntBASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 RNMTL1P1-201ENST00000454103 560 ntBASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 TUBB8P8-201ENST00000458717 1058 ntBASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AC009884.2-201ENST00000603110 324 ntBASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AC007663.3-201ENST00000609632 465 ntBASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI2Q9Y5P3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC092978.1-202ENST00000637590 1327 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC091804.1-201ENST00000486888 567 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 IMP3P2-201ENST00000489760 475 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC005962.1-201ENST00000584100 773 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AL023803.2-201ENST00000620080 638 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC011498.7-201ENST00000624986 2027 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms