Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AC079178.1-201ENST00000420915 656 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 MTX1P1-201ENST00000440904 838 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AL590640.2-201ENST00000457038 527 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AP001258.2-201ENST00000529891 490 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AC243960.2-201ENST00000600996 747 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 ECM1P1-201ENST00000604092 1279 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 AP000845.1-201ENST00000581677 2131 ntBASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PCDHGB6Q9Y5F9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PCDHGB6Q9Y5F9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
PCDHGB6Q9Y5F9 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PCDHGB6Q9Y5F9 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 AC011474.4-201ENST00000623523 2076 ntBASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 FAM8A4P-201ENST00000435433 1213 ntBASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 PPT1-213ENST00000641319 2388 ntBASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PCDHGB6Q9Y5F9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHGB6Q9Y5F9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHGB6Q9Y5F9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms