Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC16.83■□□□□ 0.29
CTDP1Q9Y5B0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CTDP1Q9Y5B0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.83■□□□□ 0.29
CTDP1Q9Y5B0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTDP1Q9Y5B0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CTDP1Q9Y5B0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 RPL8P2-201ENST00000430538 502 ntBASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 CEP164P1-201ENST00000455142 418 ntBASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC019193.1-201ENST00000506678 823 ntBASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC006480.2-201ENST00000609770 1337 ntBASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 AC013268.4-201ENST00000637413 2228 ntBASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTDP1Q9Y5B0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 AC015909.3-201ENST00000572855 1794 ntBASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 KRT18P9-201ENST00000604826 1300 ntBASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 FXNP2-201ENST00000411625 547 ntBASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 RN7SL67P-201ENST00000492147 296 ntBASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 PGAM1P5-201ENST00000548011 764 ntBASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTDP1Q9Y5B0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms