Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 KHSRPP1-201ENST00000427983 1768 ntBASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF11Q9Y3C5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 TMEM14DP-201ENST00000422205 345 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 USP32P1-208ENST00000506594 1164 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AC132938.2-201ENST00000579188 680 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AC008735.3-201ENST00000596646 500 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 MIR6074-201ENST00000612054 107 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AL591163.1-201ENST00000641757 987 ntBASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RNF11Q9Y3C5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 RNA5SP486-201ENST00000515961 83 ntBASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 AP005018.1-201ENST00000525475 301 ntBASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 AP003171.2-201ENST00000528208 925 ntBASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNF11Q9Y3C5 KRT8P24-201ENST00000560290 1559 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms