Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 IGHV3-42-201ENST00000520410 361 ntBASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 TPRX2P-201ENST00000535362 881 ntBASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AC004449.1-201ENST00000564240 433 ntBASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 RRP7BP-205ENST00000566851 833 ntBASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AP001002.3-201ENST00000623482 206 ntBASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
UBE2D4Q9Y2X8 AC004241.5-201ENST00000623870 2448 ntBASIC10.19□□□□□ -0.78
UBE2D4Q9Y2X8 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms