Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 GEMIN8P4-201ENST00000380526 729 ntBASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 OR7E115P-201ENST00000382617 1024 ntBASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 PSAT1P2-201ENST00000426107 972 ntBASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC21.03■□□□□ 0.96
SHANK2Q9UPX8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 BPIFB5P-201ENST00000457066 1099 ntBASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 IGHEP1-201ENST00000521393 651 ntBASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 HMGB1P24-201ENST00000611897 328 ntBASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHANK2Q9UPX8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC21.02■□□□□ 0.95
SHANK2Q9UPX8 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC008026.2-201ENST00000495438 348 ntBASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC233280.19-201ENST00000633223 136 ntBASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC022080.1-201ENST00000366255 781 ntBASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 ACTBP14-201ENST00000411655 1089 ntBASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 KRT18P4-201ENST00000422599 1288 ntBASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AC006548.2-201ENST00000605217 529 ntBASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 COQ4-204ENST00000608951 781 ntTSL 2 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC21.01■□□□□ 0.95
SHANK2Q9UPX8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms