Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
DENND2AQ9ULE3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 INTS4P1-203ENST00000641008 3683 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 RPL8P2-201ENST00000430538 502 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC140658.4-201ENST00000561990 352 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC103691.2-201ENST00000618824 433 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC007718.1-201ENST00000621078 280 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC051619.9-201ENST00000623237 597 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 LAP3P2-201ENST00000454686 1454 ntBASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.55■□□□□ 0.4
DENND2AQ9ULE3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC015656.1-201ENST00000624209 3578 ntBASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AP000358.1-201ENST00000456260 156 ntBASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC093752.3-201ENST00000567343 901 ntBASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 AC023908.3-201ENST00000564211 3047 ntBASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 KRT8P31-201ENST00000504812 1408 ntBASIC17.54■□□□□ 0.4
DENND2AQ9ULE3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms