Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PNMA3Q9UL41 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PNMA3Q9UL41 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 IL9RP3-201ENST00000442856 1674 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AL357563.1-201ENST00000404728 395 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SSR1P1-201ENST00000407630 814 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 RN7SKP109-201ENST00000410592 316 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AC010740.1-201ENST00000417035 684 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PSMD4P1-201ENST00000433951 1109 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 MIR5196-201ENST00000578146 115 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SIGLEC22P-201ENST00000599104 714 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AC140113.1-201ENST00000603467 169 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 LINC00431-202ENST00000636375 159 ntBASIC16.7■□□□□ 0.26
PNMA3Q9UL41 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PNMA3Q9UL41 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC136621.1-201ENST00000624017 2304 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 MIR645-201ENST00000385283 94 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC098934.1-203ENST00000442868 1262 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 OR5BD1P-201ENST00000532527 817 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 RN7SL665P-201ENST00000578793 300 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 MIR3908-201ENST00000579798 126 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC005041.3-201ENST00000606287 649 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC021016.3-201ENST00000608367 477 ntBASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.69■□□□□ 0.26
PNMA3Q9UL41 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms