Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 KRT18P4-201ENST00000422599 1288 ntBASIC18.14■□□□□ 0.5
SCN11AQ9UI33 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 RN7SL375P-201ENST00000492442 298 ntBASIC18.14■□□□□ 0.5
SCN11AQ9UI33 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 AC023968.2-201ENST00000560593 1049 ntBASIC18.14■□□□□ 0.5
SCN11AQ9UI33 CES1P2-201ENST00000566467 1242 ntBASIC18.14■□□□□ 0.5
SCN11AQ9UI33 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18.14■□□□□ 0.5
SCN11AQ9UI33 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 AC234644.1-201ENST00000406065 370 ntBASIC18.14■□□□□ 0.49
SCN11AQ9UI33 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 CICP16-201ENST00000502609 2813 ntBASIC18.14■□□□□ 0.49
SCN11AQ9UI33 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SCN11AQ9UI33 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 RCC2P1-201ENST00000452257 1476 ntBASIC18.13■□□□□ 0.49
SCN11AQ9UI33 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 AC092115.1-201ENST00000566277 1402 ntBASIC18.13■□□□□ 0.49
SCN11AQ9UI33 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 HNRNPA1P2-207ENST00000432375 960 ntBASIC18.13■□□□□ 0.49
SCN11AQ9UI33 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 AL359219.1-201ENST00000556311 934 ntBASIC18.13■□□□□ 0.49
SCN11AQ9UI33 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.13■□□□□ 0.49
SCN11AQ9UI33 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCN11AQ9UI33 FMO6P-201ENST00000236166 1620 ntBASIC18.13■□□□□ 0.49
SCN11AQ9UI33 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SCN11AQ9UI33 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN11AQ9UI33 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms