Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 AC079414.2-201ENST00000567157 1104 ntBASIC13.3□□□□□ -0.28
DKK4Q9UBT3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 PDXDC2P-206ENST00000534700 1315 ntBASIC13.3□□□□□ -0.28
DKK4Q9UBT3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DKK4Q9UBT3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 HNRNPA1P25-201ENST00000422644 937 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 IFNWP2-201ENST00000431203 580 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AL773545.2-201ENST00000442149 472 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC053503.3-201ENST00000448375 114 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 PEBP1P3-201ENST00000455475 548 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC025594.1-201ENST00000469533 543 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC093300.1-201ENST00000510368 1201 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC011431.1-201ENST00000512971 230 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC005740.1-201ENST00000515639 522 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 RN7SL605P-201ENST00000577229 281 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 RN7SL556P-201ENST00000582856 298 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC006116.2-201ENST00000589958 988 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 PRMT1P1-201ENST00000604252 1009 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC139713.2-207ENST00000641556 1292 ntBASIC13.29□□□□□ -0.28
DKK4Q9UBT3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
DKK4Q9UBT3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms