Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 BX640514.1-201ENST00000583223 1918 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 KLF2P1-201ENST00000447438 1042 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 AC104306.2-201ENST00000451877 341 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 RNMTL1P1-201ENST00000454103 560 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 AC005962.1-201ENST00000584100 773 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 Z98259.2-201ENST00000641583 609 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 TMBIM7P-202ENST00000641474 1516 ntBASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 RN7SL832P-201ENST00000607781 1756 ntBASIC12.3□□□□□ -0.44
RNF7Q9UBF6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AC090505.1-201ENST00000430515 1834 ntBASIC12.3□□□□□ -0.44
RNF7Q9UBF6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.3□□□□□ -0.44
RNF7Q9UBF6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AC092658.1-201ENST00000505836 891 ntBASIC12.3□□□□□ -0.44
RNF7Q9UBF6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AC005324.6-201ENST00000587972 613 ntBASIC12.3□□□□□ -0.44
RNF7Q9UBF6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms