Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 AC233724.13-201ENST00000598383 410 ntBASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 AC009093.2-202ENST00000620513 2079 ntBASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.83□□□□□ -0.19
NEUROD4Q9HD90 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NEUROD4Q9HD90 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NEUROD4Q9HD90 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NEUROD4Q9HD90 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC009093.10-201ENST00000641956 1442 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 BOLA2P3-201ENST00000404566 256 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 KRT223P-202ENST00000449164 1292 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC027237.1-201ENST00000560942 655 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 OR10B1P-201ENST00000601666 907 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 COX11-210ENST00000639671 696 ntBASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NEUROD4Q9HD90 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms