Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AC144522.1-201ENST00000625111 1658 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 FAM90A7P-201ENST00000382628 1395 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 FAM90A23P-201ENST00000400136 1395 ntBASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6V0A4Q9HBG4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AC133540.1-201ENST00000620845 1019 ntBASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AL805961.1-203ENST00000641078 1258 ntBASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP6V0A4Q9HBG4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 AC136759.1-202ENST00000530858 2194 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 AC113367.3-201ENST00000508316 1912 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 INTS4P1-203ENST00000641008 3683 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 TPT1P11-201ENST00000458482 498 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 MARK2P5-201ENST00000507649 634 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 AC027237.1-201ENST00000560942 655 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 SNORD3B-2-202ENST00000571722 791 ntBASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms