Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AHCYP2-201ENST00000430630 1300 ntBASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AC135782.3-201ENST00000562782 2105 ntBASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 CYP4F23P-201ENST00000593402 1579 ntBASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 RPL7P3-201ENST00000441388 714 ntBASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 AC019294.4-201ENST00000561777 2905 ntBASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RSPO3Q9BXY4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 MARK2P9-201ENST00000430958 1727 ntBASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 NUTM2HP-201ENST00000442076 2498 ntBASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AL355994.2-201ENST00000447882 704 ntBASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 RHOXF1P1-202ENST00000635473 501 ntBASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms